No. words: 989; after pruning: 963


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.0 (1,1:337)  312  0.00 0.30 0.30  BE423249Ld06P103C02P103E081F1_079.ab1        1   338 (167)  C BE423249Ld06P103C02P103E081R1_079.ab1   (146)   338     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1  C BE423249Ld06P103C02P103E081R1_079.ab1   484 
  292    BE423249Ld06P103C02P103E081F1_079.ab1   145 
  300  C BE423249Ld06P103C02P103E081R1_079.ab1   185 
  328    BE423249Ld06P103C02P103E081F1_079.ab1   181 
  360  C BE423249Ld06P103C02P103E081R1_079.ab1   125 
  368    BE423249Ld06P103C02P103E081F1_079.ab1   221 
Contig length: old 651, new 652

Contig length: old 652, new 652
New start: 0