No. words: 987; after pruning: 961


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.8 (1,1:336)  311  0.00 0.30 0.30  BE423249Ld12P103C02P103E081F1_067.ab1        1   337 (165)  C BE423249Ld12P103C02P103E081R1_067.ab1   (148)   337     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1  C BE423249Ld12P103C02P103E081R1_067.ab1   485 
  297    BE423249Ld12P103C02P103E081F1_067.ab1   148 
  301  C BE423249Ld12P103C02P103E081R1_067.ab1   185 
  333    BE423249Ld12P103C02P103E081F1_067.ab1   184 
  421  C BE423249Ld12P103C02P103E081R1_067.ab1    65 
  425    BE423249Ld12P103C02P103E081F1_067.ab1   276 
  437  C BE423249Ld12P103C02P103E081R1_067.ab1    49 
  453    BE423249Ld12P103C02P103E081F1_067.ab1   304 
Contig length: old 650, new 651

Contig length: old 651, new 651
New start: 0