No. words: 1108; after pruning: 1082


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:939)  157  0.00 0.00 0.00  BE423472Ld03P067D01P067D071F1_003.ab1      425   592 (0)  C BE423472Ld03P067D01P067D071R1_003.ab1   (0)   516   349 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1    BE423472Ld03P067D01P067D071F1_003.ab1     1 
  446  C BE423472Ld03P067D01P067D071R1_003.ab1   495 
  450    BE423472Ld03P067D01P067D071F1_003.ab1   450 
  474  C BE423472Ld03P067D01P067D071R1_003.ab1   467 
  478    BE423472Ld03P067D01P067D071F1_003.ab1   478 
  494  C BE423472Ld03P067D01P067D071R1_003.ab1   447 
  506    BE423472Ld03P067D01P067D071F1_003.ab1   506 
  514  C BE423472Ld03P067D01P067D071R1_003.ab1   427 
Contig length: old 940, new 940

Contig length: old 940, new 940
New start: 0