No. words: 1017; after pruning: 991


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.6 (1,1:937)   72  1.27 0.00 0.00  BE423472Ld05P067D01P067D071F1_016.ab1      429   507 (0)  C BE423472Ld05P067D01P067D071R1_016.ab1   (0)   510   432 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  38 nodes

 21 str. conn. components

Path
    1    BE423472Ld05P067D01P067D071F1_016.ab1     1 
  441  C BE423472Ld05P067D01P067D071R1_016.ab1   498 
  445    BE423472Ld05P067D01P067D071F1_016.ab1   445 
  453  C BE423472Ld05P067D01P067D071R1_016.ab1   486 
  457    BE423472Ld05P067D01P067D071F1_016.ab1   457 
  465  C BE423472Ld05P067D01P067D071R1_016.ab1   474 
  469    BE423472Ld05P067D01P067D071F1_016.ab1   469 
  493  C BE423472Ld05P067D01P067D071R1_016.ab1   446 
Contig length: old 938, new 938

Contig length: old 938, new 938
New start: 0