No. words: 1802; after pruning: 1762


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.8 (1,1:940)  818  0.46 0.00 0.00  BE423472Ld11P067D01P067D071F1_077.ab1       49   909 (0)  C BE423472Ld11P067D01P067D071R1_077.ab1   (0)   893    33 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  424 nodes

 214 str. conn. components

Path
    1    BE423472Ld11P067D01P067D071F1_077.ab1     1 
  332  C BE423472Ld11P067D01P067D071R1_077.ab1   610 
  336    BE423472Ld11P067D01P067D071F1_077.ab1   336 
  348  C BE423472Ld11P067D01P067D071R1_077.ab1   594 
  400    BE423472Ld11P067D01P067D071F1_077.ab1   400 
  408  C BE423472Ld11P067D01P067D071R1_077.ab1   534 
  472    BE423472Ld11P067D01P067D071F1_077.ab1   472 
  480  C BE423472Ld11P067D01P067D071R1_077.ab1   462 
  596    BE423472Ld11P067D01P067D071F1_077.ab1   596 
  604  C BE423472Ld11P067D01P067D071R1_077.ab1   338 
Contig length: old 941, new 941

Contig length: old 941, new 941
New start: 0 
S Change at: 897; seg lengths: entry 1, contig 1