No. words: 1714; after pruning: 1660


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.8 (1,1:822)  775  0.25 0.00 0.12  BE423472Ta11P067D01P137G021F1_069.ab1        5   819 (33)  C BE423472Ta11P067D01P137G021R1_069.ab1   (44)   818     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1  C BE423472Ta11P067D01P137G021R1_069.ab1   862 
   48    BE423472Ta11P067D01P137G021F1_069.ab1     8 
  480  C BE423472Ta11P067D01P137G021R1_069.ab1   383 
  492    BE423472Ta11P067D01P137G021F1_069.ab1   452 
  500  C BE423472Ta11P067D01P137G021R1_069.ab1   363 
  516    BE423472Ta11P067D01P137G021F1_069.ab1   476 
  524  C BE423472Ta11P067D01P137G021R1_069.ab1   339 
  532    BE423472Ta11P067D01P137G021F1_069.ab1   492 
  536  C BE423472Ta11P067D01P137G021R1_069.ab1   327 
  849    BE423472Ta11P067D01P137G021F1_069.ab1   810 
Contig length: old 891, new 891

Contig length: old 891, new 891
New start: 0