No. words: 1717; after pruning: 1677


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 17.0 (1,1:828)  780  0.24 0.12 0.12  BE423472Ta13P067D01P137G021F1_067.ab1        1   825 (30)  C BE423472Ta13P067D01P137G021R1_067.ab1   (33)   829     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1  C BE423472Ta13P067D01P137G021R1_067.ab1   862 
   48    BE423472Ta13P067D01P137G021F1_067.ab1    14 
  380  C BE423472Ta13P067D01P137G021R1_067.ab1   483 
  388    BE423472Ta13P067D01P137G021F1_067.ab1   354 
  456  C BE423472Ta13P067D01P137G021R1_067.ab1   407 
  492    BE423472Ta13P067D01P137G021F1_067.ab1   458 
  496  C BE423472Ta13P067D01P137G021R1_067.ab1   367 
  516    BE423472Ta13P067D01P137G021F1_067.ab1   482 
  524  C BE423472Ta13P067D01P137G021R1_067.ab1   339 
  532    BE423472Ta13P067D01P137G021F1_067.ab1   498 
  536  C BE423472Ta13P067D01P137G021R1_067.ab1   327 
  684    BE423472Ta13P067D01P137G021F1_067.ab1   650 
  688  C BE423472Ta13P067D01P137G021R1_067.ab1   175 
  849    BE423472Ta13P067D01P137G021F1_067.ab1   816 
Contig length: old 888, new 888

Contig length: old 888, new 889
New start: 0 
I Change at: 846; seg lengths: entry 1, contig 0