No. words: 1705; after pruning: 1679


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.9 (1,1:821)  777  0.00 0.00 0.12  BE423472Ta23P067D01P137G021F1_089.ab1        5   819 (26)  C BE423472Ta23P067D01P137G021R1_089.ab1   (43)   817     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C BE423472Ta23P067D01P137G021R1_089.ab1   860 
   47    BE423472Ta23P067D01P137G021F1_089.ab1     8 
  383  C BE423472Ta23P067D01P137G021R1_089.ab1   478 
  435    BE423472Ta23P067D01P137G021F1_089.ab1   396 
  455  C BE423472Ta23P067D01P137G021R1_089.ab1   406 
  515    BE423472Ta23P067D01P137G021F1_089.ab1   476 
  519  C BE423472Ta23P067D01P137G021R1_089.ab1   342 
  707    BE423472Ta23P067D01P137G021F1_089.ab1   668 
  711  C BE423472Ta23P067D01P137G021R1_089.ab1   150 
  839    BE423472Ta23P067D01P137G021F1_089.ab1   800 
Contig length: old 883, new 884

Contig length: old 884, new 884
New start: 0