No. words: 1668; after pruning: 1614


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 16.8 (1,1:820)  766  0.25 0.00 0.00  BE423472Td02P067D01P137G021F1_080.ab1        5   805 (5)  C BE423472Td02P067D01P137G021R1_080.ab1   (41)   817    17 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  398 nodes

 201 str. conn. components

Path
    1  C BE423472Td02P067D01P137G021R1_080.ab1   858 
   45    BE423472Td02P067D01P137G021F1_080.ab1     8 
  189  C BE423472Td02P067D01P137G021R1_080.ab1   670 
  193    BE423472Td02P067D01P137G021F1_080.ab1   156 
  265  C BE423472Td02P067D01P137G021R1_080.ab1   594 
  273    BE423472Td02P067D01P137G021F1_080.ab1   236 
  373  C BE423472Td02P067D01P137G021R1_080.ab1   486 
  437    BE423472Td02P067D01P137G021F1_080.ab1   400 
  453  C BE423472Td02P067D01P137G021R1_080.ab1   406 
Contig length: old 858, new 858

Contig length: old 858, new 858
New start: 0