No. words: 1709; after pruning: 1655


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 16.1 (1,1:821)  772  0.25 0.00 0.12  BE423472Td03P067D01P137G021F1_077.ab1        5   816 (33)  C BE423472Td03P067D01P137G021R1_077.ab1   (43)   817     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1  C BE423472Td03P067D01P137G021R1_077.ab1   860 
   47    BE423472Td03P067D01P137G021F1_077.ab1     8 
  387  C BE423472Td03P067D01P137G021R1_077.ab1   474 
  395    BE423472Td03P067D01P137G021F1_077.ab1   356 
  447  C BE423472Td03P067D01P137G021R1_077.ab1   414 
  455    BE423472Td03P067D01P137G021F1_077.ab1   416 
  459  C BE423472Td03P067D01P137G021R1_077.ab1   402 
  515    BE423472Td03P067D01P137G021F1_077.ab1   476 
  519  C BE423472Td03P067D01P137G021R1_077.ab1   342 
  840    BE423472Td03P067D01P137G021F1_077.ab1   801 
Contig length: old 887, new 888

Contig length: old 888, new 888
New start: 0