No. words: 1541; after pruning: 1515


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.0 (1,1:818)  645  0.00 0.00 0.00  BE423472Td07P067D01P137G021F1_073.ab1        1   677 (0)  C BE423472Td07P067D01P137G021R1_073.ab1   (45)   819   143 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C BE423472Td07P067D01P137G021R1_073.ab1   864 
   49    BE423472Td07P067D01P137G021F1_073.ab1     4 
  193  C BE423472Td07P067D01P137G021R1_073.ab1   672 
  197    BE423472Td07P067D01P137G021F1_073.ab1   152 
  221  C BE423472Td07P067D01P137G021R1_073.ab1   644 
  229    BE423472Td07P067D01P137G021F1_073.ab1   184 
  245  C BE423472Td07P067D01P137G021R1_073.ab1   620 
  249    BE423472Td07P067D01P137G021F1_073.ab1   204 
  257  C BE423472Td07P067D01P137G021R1_073.ab1   608 
  297    BE423472Td07P067D01P137G021F1_073.ab1   252 
  309  C BE423472Td07P067D01P137G021R1_073.ab1   556 
  317    BE423472Td07P067D01P137G021F1_073.ab1   272 
  325  C BE423472Td07P067D01P137G021R1_073.ab1   540 
  441    BE423472Td07P067D01P137G021F1_073.ab1   396 
  453  C BE423472Td07P067D01P137G021R1_073.ab1   412 
Contig length: old 864, new 864

Contig length: old 864, new 864
New start: 0