No. words: 1714; after pruning: 1688


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.2 (1,1:824)  770  0.12 0.00 0.36  BE423472Td10P067D01P137G021F1_072.ab1        5   827 (24)  C BE423472Td10P067D01P137G021R1_072.ab1   (43)   820     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1  C BE423472Td10P067D01P137G021R1_072.ab1   863 
   47    BE423472Td10P067D01P137G021F1_072.ab1     8 
  275  C BE423472Td10P067D01P137G021R1_072.ab1   589 
  279    BE423472Td10P067D01P137G021F1_072.ab1   240 
  479  C BE423472Td10P067D01P137G021R1_072.ab1   385 
  527    BE423472Td10P067D01P137G021F1_072.ab1   488 
  531  C BE423472Td10P067D01P137G021R1_072.ab1   333 
  803    BE423472Td10P067D01P137G021F1_072.ab1   764 
  813  C BE423472Td10P067D01P137G021R1_072.ab1    51 
  829    BE423472Td10P067D01P137G021F1_072.ab1   790 
  839  C BE423472Td10P067D01P137G021R1_072.ab1    26 
  848    BE423472Td10P067D01P137G021F1_072.ab1   810 
Contig length: old 889, new 889

Contig length: old 889, new 889
New start: 0