No. words: 1251; after pruning: 1211


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.3 (1,1:939)  264  1.28 0.32 0.96  BE423472Tu02P067D01P067D071F1_027.ab1      301   612 (0)  C BE423472Tu02P067D01P067D071R1_027.ab1   (1)   638   329 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1    BE423472Tu02P067D01P067D071F1_027.ab1     1 
  433  C BE423472Tu02P067D01P067D071R1_027.ab1   509 
  437    BE423472Tu02P067D01P067D071F1_027.ab1   437 
  469  C BE423472Tu02P067D01P067D071R1_027.ab1   473 
Contig length: old 940, new 941

Contig length: old 941, new 941
New start: 0