No. words: 1193; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.5 (1,1:838)  326  1.69 0.00 0.28  BE424200As01P067E01P067E071F1_030.ab1      258   612 (0)  C BE424200As01P067E01P067E071R1_030.ab1   (0)   581   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  162 nodes

 83 str. conn. components

Path
    1    BE424200As01P067E01P067E071F1_030.ab1     1 
  460  C BE424200As01P067E01P067E071R1_030.ab1   380 
  464    BE424200As01P067E01P067E071F1_030.ab1   464 
  496  C BE424200As01P067E01P067E071R1_030.ab1   344 
  500    BE424200As01P067E01P067E071F1_030.ab1   500 
  516  C BE424200As01P067E01P067E071R1_030.ab1   324 
  527    BE424200As01P067E01P067E071F1_030.ab1   527 
  547  C BE424200As01P067E01P067E071R1_030.ab1   293 
  559    BE424200As01P067E01P067E071F1_030.ab1   559 
  567  C BE424200As01P067E01P067E071R1_030.ab1   273 
Contig length: old 839, new 839

Contig length: old 839, new 839
New start: 0