No. words: 1185; after pruning: 1159


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:833)  333  0.57 0.00 0.28  BE424200As02P067E01P067E071F1_028.ab1      255   606 (0)  C BE424200As02P067E01P067E071R1_028.ab1   (0)   579   229 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  170 nodes

 87 str. conn. components

Path
    1    BE424200As02P067E01P067E071F1_028.ab1     1 
  491  C BE424200As02P067E01P067E071R1_028.ab1   344 
  495    BE424200As02P067E01P067E071F1_028.ab1   495 
  515  C BE424200As02P067E01P067E071R1_028.ab1   320 
  523    BE424200As02P067E01P067E071F1_028.ab1   523 
  543  C BE424200As02P067E01P067E071R1_028.ab1   292 
  555    BE424200As02P067E01P067E071F1_028.ab1   555 
  571  C BE424200As02P067E01P067E071R1_028.ab1   264 
Contig length: old 834, new 834

Contig length: old 834, new 834
New start: 0