No. words: 1318; after pruning: 1292


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.4 (1,1:820)  449  0.20 0.00 1.20  BE424200Ld03P067E01P067E071F1_046.ab1       97   598 (0)  C BE424200Ld03P067E01P067E071R1_046.ab1   (0)   720   225 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1    BE424200Ld03P067E01P067E071F1_046.ab1     1 
  324  C BE424200Ld03P067E01P067E071R1_046.ab1   499 
  328    BE424200Ld03P067E01P067E071F1_046.ab1   328 
  332  C BE424200Ld03P067E01P067E071R1_046.ab1   491 
  336    BE424200Ld03P067E01P067E071F1_046.ab1   336 
  348  C BE424200Ld03P067E01P067E071R1_046.ab1   475 
  360    BE424200Ld03P067E01P067E071F1_046.ab1   360 
  372  C BE424200Ld03P067E01P067E071R1_046.ab1   451 
  384    BE424200Ld03P067E01P067E071F1_046.ab1   384 
  388  C BE424200Ld03P067E01P067E071R1_046.ab1   435 
  404    BE424200Ld03P067E01P067E071F1_046.ab1   404 
  408  C BE424200Ld03P067E01P067E071R1_046.ab1   415 
  412    BE424200Ld03P067E01P067E071F1_046.ab1   412 
  416  C BE424200Ld03P067E01P067E071R1_046.ab1   407 
Contig length: old 821, new 822

Contig length: old 822, new 822
New start: 0