No. words: 1135; after pruning: 1109


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.6 (1,1:822)  295  0.96 0.00 0.00  BE424200Ld10P067E01P067E071F1_018.ab1      286   597 (0)  C BE424200Ld10P067E01P067E071R1_018.ab1   (0)   538   227 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    BE424200Ld10P067E01P067E071F1_018.ab1     1 
  421  C BE424200Ld10P067E01P067E071R1_018.ab1   403 
  433    BE424200Ld10P067E01P067E071F1_018.ab1   433 
  445  C BE424200Ld10P067E01P067E071R1_018.ab1   379 
  453    BE424200Ld10P067E01P067E071F1_018.ab1   453 
  461  C BE424200Ld10P067E01P067E071R1_018.ab1   363 
  485    BE424200Ld10P067E01P067E071F1_018.ab1   485 
  489  C BE424200Ld10P067E01P067E071R1_018.ab1   335 
  505    BE424200Ld10P067E01P067E071F1_018.ab1   505 
  509  C BE424200Ld10P067E01P067E071R1_018.ab1   315 
  513    BE424200Ld10P067E01P067E071F1_018.ab1   513 
  517  C BE424200Ld10P067E01P067E071R1_018.ab1   307 
  529    BE424200Ld10P067E01P067E071F1_018.ab1   529 
  537  C BE424200Ld10P067E01P067E071R1_018.ab1   287 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0