No. words: 1335; after pruning: 1309


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:623)  586  0.16 0.16 0.32  BE424200Ta11P101C01P067E071F2_047.ab1        1   625 (37)  C BE424200Ta11P101C01P067E071R2_047.ab1   (49)   624     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE424200Ta11P101C01P067E071R2_047.ab1   673 
  507    BE424200Ta11P101C01P067E071F2_047.ab1   457 
  551  C BE424200Ta11P101C01P067E071R2_047.ab1   123 
  559    BE424200Ta11P101C01P067E071F2_047.ab1   509 
  595  C BE424200Ta11P101C01P067E071R2_047.ab1    79 
  603    BE424200Ta11P101C01P067E071F2_047.ab1   553 
Contig length: old 711, new 712

Contig length: old 712, new 712
New start: 0