No. words: 1317; after pruning: 1291


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.6 (1,1:613)  582  0.00 0.16 0.00  BE424200Ta19P101C01P067E071F2_039.ab1        6   614 (49)  C BE424200Ta19P101C01P067E071R2_039.ab1   (44)   610     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE424200Ta19P101C01P067E071R2_039.ab1   654 
   98    BE424200Ta19P101C01P067E071F2_039.ab1    58 
  102  C BE424200Ta19P101C01P067E071R2_039.ab1   553 
  110    BE424200Ta19P101C01P067E071F2_039.ab1    70 
  114  C BE424200Ta19P101C01P067E071R2_039.ab1   541 
  146    BE424200Ta19P101C01P067E071F2_039.ab1   106 
  150  C BE424200Ta19P101C01P067E071R2_039.ab1   505 
  170    BE424200Ta19P101C01P067E071F2_039.ab1   130 
  174  C BE424200Ta19P101C01P067E071R2_039.ab1   481 
  182    BE424200Ta19P101C01P067E071F2_039.ab1   142 
  186  C BE424200Ta19P101C01P067E071R2_039.ab1   469 
  206    BE424200Ta19P101C01P067E071F2_039.ab1   166 
  222  C BE424200Ta19P101C01P067E071R2_039.ab1   433 
  246    BE424200Ta19P101C01P067E071F2_039.ab1   206 
  254  C BE424200Ta19P101C01P067E071R2_039.ab1   401 
  478    BE424200Ta19P101C01P067E071F2_039.ab1   438 
  534  C BE424200Ta19P101C01P067E071R2_039.ab1   121 
  542    BE424200Ta19P101C01P067E071F2_039.ab1   502 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0