No. words: 1244; after pruning: 1218


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:466)  452  0.00 0.21 0.21  BE424246Ld05P129C02P129C081F1_084.ab1        1   467 (165)  C BE424246Ld05P129C02P129C081R1_084.ab1   (145)   467     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE424246Ld05P129C02P129C081R1_084.ab1   612 
  191    BE424246Ld05P129C02P129C081F1_084.ab1    45 
  203  C BE424246Ld05P129C02P129C081R1_084.ab1   410 
  299    BE424246Ld05P129C02P129C081F1_084.ab1   153 
  311  C BE424246Ld05P129C02P129C081R1_084.ab1   302 
  399    BE424246Ld05P129C02P129C081F1_084.ab1   253 
  407  C BE424246Ld05P129C02P129C081R1_084.ab1   206 
  451    BE424246Ld05P129C02P129C081F1_084.ab1   305 
  463  C BE424246Ld05P129C02P129C081R1_084.ab1   150 
  471    BE424246Ld05P129C02P129C081F1_084.ab1   325 
  475  C BE424246Ld05P129C02P129C081R1_084.ab1   138 
  479    BE424246Ld05P129C02P129C081F1_084.ab1   333 
  491  C BE424246Ld05P129C02P129C081R1_084.ab1   122 
  499    BE424246Ld05P129C02P129C081F1_084.ab1   353 
  503  C BE424246Ld05P129C02P129C081R1_084.ab1   110 
  515    BE424246Ld05P129C02P129C081F1_084.ab1   369 
  519  C BE424246Ld05P129C02P129C081R1_084.ab1    94 
  523    BE424246Ld05P129C02P129C081F1_084.ab1   377 
  535  C BE424246Ld05P129C02P129C081R1_084.ab1    78 
  539    BE424246Ld05P129C02P129C081F1_084.ab1   393 
  583  C BE424246Ld05P129C02P129C081R1_084.ab1    30 
  587    BE424246Ld05P129C02P129C081F1_084.ab1   441 
Contig length: old 777, new 778

Contig length: old 778, new 778
New start: 0