No. words: 1275; after pruning: 1249


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:466)  457  0.00 0.21 0.00  BE424246Ld09P129C02P129C081F1_009.ab1        1   467 (191)  C BE424246Ld09P129C02P129C081R1_009.ab1   (149)   468     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE424246Ld09P129C02P129C081R1_009.ab1   617 
  199    BE424246Ld09P129C02P129C081F1_009.ab1    49 
  203  C BE424246Ld09P129C02P129C081R1_009.ab1   415 
  327    BE424246Ld09P129C02P129C081F1_009.ab1   177 
  331  C BE424246Ld09P129C02P129C081R1_009.ab1   287 
  355    BE424246Ld09P129C02P129C081F1_009.ab1   205 
  363  C BE424246Ld09P129C02P129C081R1_009.ab1   255 
  379    BE424246Ld09P129C02P129C081F1_009.ab1   229 
  387  C BE424246Ld09P129C02P129C081R1_009.ab1   231 
  407    BE424246Ld09P129C02P129C081F1_009.ab1   257 
  419  C BE424246Ld09P129C02P129C081R1_009.ab1   199 
  451    BE424246Ld09P129C02P129C081F1_009.ab1   301 
  475  C BE424246Ld09P129C02P129C081R1_009.ab1   143 
  483    BE424246Ld09P129C02P129C081F1_009.ab1   333 
  487  C BE424246Ld09P129C02P129C081R1_009.ab1   131 
  503    BE424246Ld09P129C02P129C081F1_009.ab1   353 
  507  C BE424246Ld09P129C02P129C081R1_009.ab1   111 
  531    BE424246Ld09P129C02P129C081F1_009.ab1   381 
  595  C BE424246Ld09P129C02P129C081R1_009.ab1    23 
  599    BE424246Ld09P129C02P129C081F1_009.ab1   449 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0