No. words: 1025; after pruning: 999


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:464)  449  0.43 0.22 0.00  BE424246Tu01P129C02P129C081F1_020.ab1        1   465 (52)  C BE424246Tu01P129C02P129C081R1_020.ab1   (42)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE424246Tu01P129C02P129C081R1_020.ab1   508 
   84    BE424246Tu01P129C02P129C081F1_020.ab1    41 
  103  C BE424246Tu01P129C02P129C081R1_020.ab1   406 
  123    BE424246Tu01P129C02P129C081F1_020.ab1    80 
  131  C BE424246Tu01P129C02P129C081R1_020.ab1   378 
  135    BE424246Tu01P129C02P129C081F1_020.ab1    92 
  139  C BE424246Tu01P129C02P129C081R1_020.ab1   370 
  163    BE424246Tu01P129C02P129C081F1_020.ab1   120 
  167  C BE424246Tu01P129C02P129C081R1_020.ab1   342 
  199    BE424246Tu01P129C02P129C081F1_020.ab1   156 
  211  C BE424246Tu01P129C02P129C081R1_020.ab1   298 
  223    BE424246Tu01P129C02P129C081F1_020.ab1   180 
  279  C BE424246Tu01P129C02P129C081R1_020.ab1   230 
  283    BE424246Tu01P129C02P129C081F1_020.ab1   240 
  311  C BE424246Tu01P129C02P129C081R1_020.ab1   198 
  347    BE424246Tu01P129C02P129C081F1_020.ab1   304 
  379  C BE424246Tu01P129C02P129C081R1_020.ab1   130 
  383    BE424246Tu01P129C02P129C081F1_020.ab1   340 
  399  C BE424246Tu01P129C02P129C081R1_020.ab1   110 
  415    BE424246Tu01P129C02P129C081F1_020.ab1   372 
  423  C BE424246Tu01P129C02P129C081R1_020.ab1    86 
  427    BE424246Tu01P129C02P129C081F1_020.ab1   384 
Contig length: old 560, new 560

Contig length: old 560, new 560
New start: 0