No. words: 1008; after pruning: 982


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    6   -2.2 -2.2 (1,1:879)  107  4.10 0.00 0.00  BE425919At01P067H01P067H071F1_040.ab1      401   522 (6)  C BE425919At01P067H01P067H071R1_040.ab1   (0)   480   359 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.2       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  48 nodes

 26 str. conn. components

Path
    1    BE425919At01P067H01P067H071F1_040.ab1     1 
  482  C BE425919At01P067H01P067H071R1_040.ab1   399 
  486    BE425919At01P067H01P067H071F1_040.ab1   486 
  509  C BE425919At01P067H01P067H071R1_040.ab1   372 
Contig length: old 880, new 880

Contig length: old 880, new 880
New start: 0