No. words: 1176; after pruning: 1150


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 4.5 (1,1:871)  288  0.66 0.33 0.00  BE425919Ld01P067H01P067H071F1_030.ab1      321   621 (2)  C BE425919Ld01P067H01P067H071R1_030.ab1   (0)   553   252 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1    BE425919Ld01P067H01P067H071F1_030.ab1     1 
  460  C BE425919Ld01P067H01P067H071R1_030.ab1   414 
  464    BE425919Ld01P067H01P067H071F1_030.ab1   464 
  476  C BE425919Ld01P067H01P067H071R1_030.ab1   398 
  484    BE425919Ld01P067H01P067H071F1_030.ab1   484 
  492  C BE425919Ld01P067H01P067H071R1_030.ab1   382 
  500    BE425919Ld01P067H01P067H071F1_030.ab1   500 
  504  C BE425919Ld01P067H01P067H071R1_030.ab1   370 
  536    BE425919Ld01P067H01P067H071F1_030.ab1   536 
  548  C BE425919Ld01P067H01P067H071R1_030.ab1   326 
Contig length: old 872, new 873

Contig length: old 873, new 873
New start: 0