No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.8 (1,1:898)  171  0.00 0.00 0.00  BE425919Ld03P067H01P067H071F1_026.ab1      372   543 (0)  C BE425919Ld03P067H01P067H071R1_026.ab1   (0)   528   357 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1    BE425919Ld03P067H01P067H071F1_026.ab1     1 
  431  C BE425919Ld03P067H01P067H071R1_026.ab1   469 
  439    BE425919Ld03P067H01P067H071F1_026.ab1   439 
  463  C BE425919Ld03P067H01P067H071R1_026.ab1   437 
  467    BE425919Ld03P067H01P067H071F1_026.ab1   467 
  475  C BE425919Ld03P067H01P067H071R1_026.ab1   425 
  479    BE425919Ld03P067H01P067H071F1_026.ab1   479 
  487  C BE425919Ld03P067H01P067H071R1_026.ab1   413 
Contig length: old 899, new 899

Contig length: old 899, new 899
New start: 0