No. words: 1505; after pruning: 1479


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    4   -0.2 -0.2 (1,1:717)  658  1.82 0.14 0.14  BE425919Sn32P067H01P137D031F1_021.ab1        1   714 (39)  C BE425919Sn32P067H01P137D031R1_021.ab1   (34)   718     5 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.2       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE425919Sn32P067H01P137D031R1_021.ab1   752 
   45    BE425919Sn32P067H01P137D031F1_021.ab1    10 
  181  C BE425919Sn32P067H01P137D031R1_021.ab1   572 
  744    BE425919Sn32P067H01P137D031F1_021.ab1   710 
Contig length: old 787, new 787

Contig length: old 787, new 788
New start: 0 
I Change at: 720; seg lengths: entry 1, contig 0