No. words: 970; after pruning: 944


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.6 -2.6 (1,1:887)   73  3.66 0.00 0.00  BE425919Tu02P067H01P067H071F1_046.ab1      440   521 (0)  C BE425919Tu02P067H01P067H071R1_046.ab1   (0)   449   368 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.6       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  34 nodes

 19 str. conn. components

Path
    1    BE425919Tu02P067H01P067H071F1_046.ab1     1 
  498  C BE425919Tu02P067H01P067H071R1_046.ab1   391 
  510    BE425919Tu02P067H01P067H071F1_046.ab1   510 
  514  C BE425919Tu02P067H01P067H071R1_046.ab1   375 
Contig length: old 888, new 888

Contig length: old 888, new 888
New start: 0