No. words: 1014; after pruning: 988


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:564)  437  0.22 0.00 0.22  BE426222As01P067A02P067A081F1_063.ab1       44   493 (0)  C BE426222As01P067A02P067A081R1_063.ab1   (0)   521    73 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1    BE426222As01P067A02P067A081F1_063.ab1     1 
  334  C BE426222As01P067A02P067A081R1_063.ab1   232 
Contig length: old 565, new 565

Contig length: old 565, new 565
New start: 0