No. words: 1050; after pruning: 1024


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:543)  441  0.22 0.22 0.22  BE426222As02P067A02P067A081F1_061.ab1        1   459 (0)  C BE426222As02P067A02P067A081R1_061.ab1   (48)   543    85 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE426222As02P067A02P067A081R1_061.ab1   591 
   56    BE426222As02P067A02P067A081F1_061.ab1     8 
  276  C BE426222As02P067A02P067A081R1_061.ab1   316 
  304    BE426222As02P067A02P067A081F1_061.ab1   256 
  380  C BE426222As02P067A02P067A081R1_061.ab1   212 
  482    BE426222As02P067A02P067A081F1_061.ab1   434 
  486  C BE426222As02P067A02P067A081R1_061.ab1   106 
Contig length: old 591, new 591

Contig length: old 591, new 591
New start: 0