No. words: 1058; after pruning: 1032


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.8 (1,1:575)  449  0.85 0.00 0.00  BE426222At01P067A02P067A081F1_059.ab1        5   472 (0)  C BE426222At01P067A02P067A081R1_059.ab1   (14)   572   105 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE426222At01P067A02P067A081R1_059.ab1   586 
   22    BE426222At01P067A02P067A081F1_059.ab1    12 
  259  C BE426222At01P067A02P067A081R1_059.ab1   328 
  279    BE426222At01P067A02P067A081F1_059.ab1   269 
  347  C BE426222At01P067A02P067A081R1_059.ab1   240 
  457    BE426222At01P067A02P067A081F1_059.ab1   447 
  461  C BE426222At01P067A02P067A081R1_059.ab1   126 
Contig length: old 586, new 586

Contig length: old 586, new 586
New start: 0