No. words: 1062; after pruning: 1036


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.4 (1,1:547)  499  0.39 0.00 0.00  BE426222Ld02P067A02P067A081F1_018.ab1        4   516 (0)  C BE426222Ld02P067A02P067A081R1_018.ab1   (1)   545    33 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    BE426222Ld02P067A02P067A081F1_018.ab1     1 
    7  C BE426222Ld02P067A02P067A081R1_018.ab1   542 
   11    BE426222Ld02P067A02P067A081F1_018.ab1    11 
  169  C BE426222Ld02P067A02P067A081R1_018.ab1   380 
  173    BE426222Ld02P067A02P067A081F1_018.ab1   173 
  337  C BE426222Ld02P067A02P067A081R1_018.ab1   212 
Contig length: old 548, new 548

Contig length: old 548, new 548
New start: 0