No. words: 1429; after pruning: 1389


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:553)  544  0.00 0.00 0.00  BE426222Ld11P067A02P067A081F1_079.ab1        1   554 (167)  C BE426222Ld11P067A02P067A081R1_079.ab1   (154)   554     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BE426222Ld11P067A02P067A081R1_079.ab1   708 
  182    BE426222Ld11P067A02P067A081F1_079.ab1    28 
  186  C BE426222Ld11P067A02P067A081R1_079.ab1   523 
  190    BE426222Ld11P067A02P067A081F1_079.ab1    36 
  194  C BE426222Ld11P067A02P067A081R1_079.ab1   515 
  210    BE426222Ld11P067A02P067A081F1_079.ab1    56 
  218  C BE426222Ld11P067A02P067A081R1_079.ab1   491 
  226    BE426222Ld11P067A02P067A081F1_079.ab1    72 
  242  C BE426222Ld11P067A02P067A081R1_079.ab1   467 
  246    BE426222Ld11P067A02P067A081F1_079.ab1    92 
  250  C BE426222Ld11P067A02P067A081R1_079.ab1   459 
  266    BE426222Ld11P067A02P067A081F1_079.ab1   112 
  274  C BE426222Ld11P067A02P067A081R1_079.ab1   435 
  278    BE426222Ld11P067A02P067A081F1_079.ab1   124 
  286  C BE426222Ld11P067A02P067A081R1_079.ab1   423 
  290    BE426222Ld11P067A02P067A081F1_079.ab1   136 
Contig length: old 875, new 875

Contig length: old 875, new 875
New start: 0 
S Change at: 834; seg lengths: entry 1, contig 1