No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.2 (1,1:558)  428  0.00 0.00 0.00  BE426222Tu02P067A02P067A081F1_034.ab1        5   439 (0)  C BE426222Tu02P067A02P067A081R1_034.ab1   (34)   555   121 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE426222Tu02P067A02P067A081R1_034.ab1   589 
   54    BE426222Tu02P067A02P067A081F1_034.ab1    24 
  106  C BE426222Tu02P067A02P067A081R1_034.ab1   484 
  114    BE426222Tu02P067A02P067A081F1_034.ab1    84 
  138  C BE426222Tu02P067A02P067A081R1_034.ab1   452 
  142    BE426222Tu02P067A02P067A081F1_034.ab1   112 
  170  C BE426222Tu02P067A02P067A081R1_034.ab1   420 
  350    BE426222Tu02P067A02P067A081F1_034.ab1   320 
  374  C BE426222Tu02P067A02P067A081R1_034.ab1   216 
Contig length: old 589, new 589

Contig length: old 589, new 589
New start: 0