No. words: 1221; after pruning: 1195


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:468)  467  0.00 0.00 0.00  BE426287Ld02P103G02P103G081F1_079.ab1        1   469 (136)  C BE426287Ld02P103G02P103G081R1_079.ab1   (147)   469     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE426287Ld02P103G02P103G081R1_079.ab1   616 
  227    BE426287Ld02P103G02P103G081F1_079.ab1    80 
  231  C BE426287Ld02P103G02P103G081R1_079.ab1   386 
  279    BE426287Ld02P103G02P103G081F1_079.ab1   132 
  287  C BE426287Ld02P103G02P103G081R1_079.ab1   330 
  395    BE426287Ld02P103G02P103G081F1_079.ab1   248 
  499  C BE426287Ld02P103G02P103G081R1_079.ab1   118 
  535    BE426287Ld02P103G02P103G081F1_079.ab1   388 
Contig length: old 752, new 752

Contig length: old 752, new 752
New start: 0