No. words: 1001; after pruning: 975


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.0 (1,1:418)  388  2.16 0.00 0.00  BE426287Tu01P103G02P103G081F1_094.ab1        4   419 (62)  C BE426287Tu01P103G02P103G081R1_094.ab1   (104)   416     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C BE426287Tu01P103G02P103G081R1_094.ab1   520 
  116    BE426287Tu01P103G02P103G081F1_094.ab1    15 
  120  C BE426287Tu01P103G02P103G081R1_094.ab1   401 
  136    BE426287Tu01P103G02P103G081F1_094.ab1    35 
  140  C BE426287Tu01P103G02P103G081R1_094.ab1   381 
  144    BE426287Tu01P103G02P103G081F1_094.ab1    43 
  152  C BE426287Tu01P103G02P103G081R1_094.ab1   369 
  268    BE426287Tu01P103G02P103G081F1_094.ab1   167 
  272  C BE426287Tu01P103G02P103G081R1_094.ab1   249 
  340    BE426287Tu01P103G02P103G081F1_094.ab1   239 
  344  C BE426287Tu01P103G02P103G081R1_094.ab1   177 
  372    BE426287Tu01P103G02P103G081F1_094.ab1   271 
  376  C BE426287Tu01P103G02P103G081R1_094.ab1   145 
  438    BE426287Tu01P103G02P103G081F1_094.ab1   337 
  442  C BE426287Tu01P103G02P103G081R1_094.ab1    79 
  446    BE426287Tu01P103G02P103G081F1_094.ab1   345 
  454  C BE426287Tu01P103G02P103G081R1_094.ab1    67 
  474    BE426287Tu01P103G02P103G081F1_094.ab1   373 
Contig length: old 582, new 582

Contig length: old 582, new 582
New start: 0