No. words: 1246; after pruning: 1220


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.3 (1,1:462)  450  0.22 0.22 0.00  BE426298Ld02P103B03P103B091F1_083.ab1        5   463 (145)  C BE426298Ld02P103B03P103B091R1_083.ab1   (178)   460     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE426298Ld02P103B03P103B091R1_083.ab1   638 
  295    BE426298Ld02P103B03P103B091F1_083.ab1   120 
  303  C BE426298Ld02P103B03P103B091R1_083.ab1   336 
  319    BE426298Ld02P103B03P103B091F1_083.ab1   144 
  327  C BE426298Ld02P103B03P103B091R1_083.ab1   312 
  335    BE426298Ld02P103B03P103B091F1_083.ab1   160 
  347  C BE426298Ld02P103B03P103B091R1_083.ab1   292 
  387    BE426298Ld02P103B03P103B091F1_083.ab1   212 
  555  C BE426298Ld02P103B03P103B091R1_083.ab1    84 
  567    BE426298Ld02P103B03P103B091F1_083.ab1   392 
Contig length: old 783, new 783

Contig length: old 783, new 783
New start: 0