No. words: 1231; after pruning: 1205


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:448)  443  0.00 0.22 0.00  BE426298Ld07P103B03P103B091F1_088.ab1        1   449 (156)  C BE426298Ld07P103B03P103B091R1_088.ab1   (176)   450     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE426298Ld07P103B03P103B091R1_088.ab1   626 
  278    BE426298Ld07P103B03P103B091F1_088.ab1   101 
  302  C BE426298Ld07P103B03P103B091R1_088.ab1   325 
  314    BE426298Ld07P103B03P103B091F1_088.ab1   137 
  326  C BE426298Ld07P103B03P103B091R1_088.ab1   301 
  334    BE426298Ld07P103B03P103B091F1_088.ab1   157 
  342  C BE426298Ld07P103B03P103B091R1_088.ab1   285 
  366    BE426298Ld07P103B03P103B091F1_088.ab1   189 
  466  C BE426298Ld07P103B03P103B091R1_088.ab1   161 
  494    BE426298Ld07P103B03P103B091F1_088.ab1   317 
  534  C BE426298Ld07P103B03P103B091R1_088.ab1    93 
  538    BE426298Ld07P103B03P103B091F1_088.ab1   361 
Contig length: old 782, new 782

Contig length: old 782, new 782
New start: 0