No. words: 1242; after pruning: 1216


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:460)  455  0.00 0.22 0.00  BE426298Ld08P103B03P103B091F1_086.ab1        1   461 (170)  C BE426298Ld08P103B03P103B091R1_086.ab1   (149)   462     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE426298Ld08P103B03P103B091R1_086.ab1   611 
  171    BE426298Ld08P103B03P103B091F1_086.ab1    21 
  175  C BE426298Ld08P103B03P103B091R1_086.ab1   437 
  219    BE426298Ld08P103B03P103B091F1_086.ab1    69 
  227  C BE426298Ld08P103B03P103B091R1_086.ab1   385 
  239    BE426298Ld08P103B03P103B091F1_086.ab1    89 
  243  C BE426298Ld08P103B03P103B091R1_086.ab1   369 
  263    BE426298Ld08P103B03P103B091F1_086.ab1   113 
  275  C BE426298Ld08P103B03P103B091R1_086.ab1   337 
  307    BE426298Ld08P103B03P103B091F1_086.ab1   157 
  319  C BE426298Ld08P103B03P103B091R1_086.ab1   293 
  339    BE426298Ld08P103B03P103B091F1_086.ab1   189 
  443  C BE426298Ld08P103B03P103B091R1_086.ab1   169 
  455    BE426298Ld08P103B03P103B091F1_086.ab1   305 
  463  C BE426298Ld08P103B03P103B091R1_086.ab1   149 
  467    BE426298Ld08P103B03P103B091F1_086.ab1   317 
  531  C BE426298Ld08P103B03P103B091R1_086.ab1    81 
  539    BE426298Ld08P103B03P103B091F1_086.ab1   389 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0