No. words: 1322; after pruning: 1283


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.7 -0.7 (1,1:342)  256  7.60 0.29 0.00  BE426356Ld09P067D02P067D081F1_012.ab1        1   342 (318)  C BE426356Ld09P067D02P067D081R1_012.ab1   (89)   343     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.7       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    3

Chimera merges: 


Contig 1:  100 nodes

 52 str. conn. components

Path
    1  C BE426356Ld09P067D02P067D081R1_012.ab1   432 
   93    BE426356Ld09P067D02P067D081F1_012.ab1     4 
Contig length: old 749, new 749

Contig length: old 749, new 750
New start: 0 
I Change at: 102; seg lengths: entry 4, contig 3