No. words: 861; after pruning: 835


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:392)  381  0.00 0.25 0.00  BE426356Sn28P067D02P116E021F1_073.ab1        1   393 (39)  C BE426356Sn28P067D02P116E021R1_073.ab1   (35)   394     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C BE426356Sn28P067D02P116E021R1_073.ab1   429 
  130    BE426356Sn28P067D02P116E021F1_073.ab1    94 
  150  C BE426356Sn28P067D02P116E021R1_073.ab1   280 
  154    BE426356Sn28P067D02P116E021F1_073.ab1   118 
  158  C BE426356Sn28P067D02P116E021R1_073.ab1   272 
  162    BE426356Sn28P067D02P116E021F1_073.ab1   126 
  182  C BE426356Sn28P067D02P116E021R1_073.ab1   248 
  278    BE426356Sn28P067D02P116E021F1_073.ab1   242 
  390  C BE426356Sn28P067D02P116E021R1_073.ab1    40 
  394    BE426356Sn28P067D02P116E021F1_073.ab1   358 
Contig length: old 468, new 468

Contig length: old 468, new 468
New start: 0