No. words: 1020; after pruning: 994


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:508)  490  0.00 0.00 0.00  BE426356Tu01P067D02P067D081F1_052.ab1       16   509 (17)  C BE426356Tu01P067D02P067D081R1_052.ab1   (0)   494     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1    BE426356Tu01P067D02P067D081F1_052.ab1     1 
  267  C BE426356Tu01P067D02P067D081R1_052.ab1   243 
  271    BE426356Tu01P067D02P067D081F1_052.ab1   271 
  279  C BE426356Tu01P067D02P067D081R1_052.ab1   231 
  283    BE426356Tu01P067D02P067D081F1_052.ab1   283 
  327  C BE426356Tu01P067D02P067D081R1_052.ab1   183 
  451    BE426356Tu01P067D02P067D081F1_052.ab1   451 
  459  C BE426356Tu01P067D02P067D081R1_052.ab1    51 
  479    BE426356Tu01P067D02P067D081F1_052.ab1   479 
  483  C BE426356Tu01P067D02P067D081R1_052.ab1    27 
  495    BE426356Tu01P067D02P067D081F1_052.ab1   495 
Contig length: old 526, new 526

Contig length: old 526, new 526
New start: 0