No. words: 1566; after pruning: 1540


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:1162)  389  0.00 0.00 0.00  BE426393Ld10P016D02P016D081F1_038.ab1      388   790 (0)  C BE426393Ld10P016D02P016D081R1_038.ab1   (0)   776   374 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1    BE426393Ld10P016D02P016D081F1_038.ab1     1 
  583  C BE426393Ld10P016D02P016D081R1_038.ab1   581 
  603    BE426393Ld10P016D02P016D081F1_038.ab1   603 
  611  C BE426393Ld10P016D02P016D081R1_038.ab1   553 
Contig length: old 1163, new 1163

Contig length: old 1163, new 1163
New start: 0