No. words: 1188; after pruning: 1162


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:552)  537  0.00 0.00 0.18  BE426418Sn25P146A04P129E081R1_023.ab1        1   553 (38)  C BE426418Sn25P146A04P129E081F1_023.ab1   (45)   552     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE426418Sn25P146A04P129E081F1_023.ab1   597 
  109    BE426418Sn25P146A04P129E081R1_023.ab1    64 
  121  C BE426418Sn25P146A04P129E081F1_023.ab1   477 
  137    BE426418Sn25P146A04P129E081R1_023.ab1    92 
  141  C BE426418Sn25P146A04P129E081F1_023.ab1   457 
  157    BE426418Sn25P146A04P129E081R1_023.ab1   112 
  173  C BE426418Sn25P146A04P129E081F1_023.ab1   425 
  253    BE426418Sn25P146A04P129E081R1_023.ab1   208 
  269  C BE426418Sn25P146A04P129E081F1_023.ab1   329 
  297    BE426418Sn25P146A04P129E081R1_023.ab1   252 
  361  C BE426418Sn25P146A04P129E081F1_023.ab1   237 
  385    BE426418Sn25P146A04P129E081R1_023.ab1   340 
  469  C BE426418Sn25P146A04P129E081F1_023.ab1   129 
  501    BE426418Sn25P146A04P129E081R1_023.ab1   456 
Contig length: old 635, new 636

Contig length: old 636, new 636
New start: 0