No. words: 1168; after pruning: 1142


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.4 (1,1:483)  412  3.93 0.00 0.21  BE426418Sn26P146A04P129E081R1_024.ab1        1   484 (141)  C BE426418Sn26P146A04P129E081F1_024.ab1   (60)   483     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1  C BE426418Sn26P146A04P129E081F1_024.ab1   543 
   76    BE426418Sn26P146A04P129E081R1_024.ab1    16 
   80  C BE426418Sn26P146A04P129E081F1_024.ab1   464 
  111    BE426418Sn26P146A04P129E081R1_024.ab1    51 
  119  C BE426418Sn26P146A04P129E081F1_024.ab1   425 
  128    BE426418Sn26P146A04P129E081R1_024.ab1    68 
  136  C BE426418Sn26P146A04P129E081F1_024.ab1   408 
  152    BE426418Sn26P146A04P129E081R1_024.ab1    92 
  156  C BE426418Sn26P146A04P129E081F1_024.ab1   388 
  164    BE426418Sn26P146A04P129E081R1_024.ab1   104 
  176  C BE426418Sn26P146A04P129E081F1_024.ab1   368 
  184    BE426418Sn26P146A04P129E081R1_024.ab1   124 
  188  C BE426418Sn26P146A04P129E081F1_024.ab1   356 
  196    BE426418Sn26P146A04P129E081R1_024.ab1   136 
  208  C BE426418Sn26P146A04P129E081F1_024.ab1   336 
  216    BE426418Sn26P146A04P129E081R1_024.ab1   156 
  220  C BE426418Sn26P146A04P129E081F1_024.ab1   324 
  228    BE426418Sn26P146A04P129E081R1_024.ab1   168 
  240  C BE426418Sn26P146A04P129E081F1_024.ab1   304 
  255    BE426418Sn26P146A04P129E081R1_024.ab1   195 
  319  C BE426418Sn26P146A04P129E081F1_024.ab1   225 
  327    BE426418Sn26P146A04P129E081R1_024.ab1   267 
  357  C BE426418Sn26P146A04P129E081F1_024.ab1   187 
  398    BE426418Sn26P146A04P129E081R1_024.ab1   339 
  408  C BE426418Sn26P146A04P129E081F1_024.ab1   136 
  416    BE426418Sn26P146A04P129E081R1_024.ab1   357 
  420  C BE426418Sn26P146A04P129E081F1_024.ab1   124 
  431    BE426418Sn26P146A04P129E081R1_024.ab1   372 
  439  C BE426418Sn26P146A04P129E081F1_024.ab1   105 
  443    BE426418Sn26P146A04P129E081R1_024.ab1   384 
  457  C BE426418Sn26P146A04P129E081F1_024.ab1    87 
  461    BE426418Sn26P146A04P129E081R1_024.ab1   402 
  465  C BE426418Sn26P146A04P129E081F1_024.ab1    79 
  493    BE426418Sn26P146A04P129E081R1_024.ab1   434 
  501  C BE426418Sn26P146A04P129E081F1_024.ab1    43 
  505    BE426418Sn26P146A04P129E081R1_024.ab1   446 
  509  C BE426418Sn26P146A04P129E081F1_024.ab1    35 
  517    BE426418Sn26P146A04P129E081R1_024.ab1   458 
Contig length: old 684, new 684

Contig length: old 684, new 684
New start: 0 
S Change at: 284; seg lengths: entry 1, contig 1
S Change at: 394; seg lengths: entry 1, contig 1