No. words: 1184; after pruning: 1158


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.5 (1,1:527)  499  0.95 0.00 0.00  BE426418Sn29P146A04P129E081R1_019.ab1        1   526 (71)  C BE426418Sn29P146A04P129E081F1_019.ab1   (59)   528     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE426418Sn29P146A04P129E081F1_019.ab1   587 
   71    BE426418Sn29P146A04P129E081R1_019.ab1    12 
   75  C BE426418Sn29P146A04P129E081F1_019.ab1   513 
   79    BE426418Sn29P146A04P129E081R1_019.ab1    20 
   87  C BE426418Sn29P146A04P129E081F1_019.ab1   501 
  103    BE426418Sn29P146A04P129E081R1_019.ab1    44 
  107  C BE426418Sn29P146A04P129E081F1_019.ab1   481 
  111    BE426418Sn29P146A04P129E081R1_019.ab1    52 
  131  C BE426418Sn29P146A04P129E081F1_019.ab1   457 
  139    BE426418Sn29P146A04P129E081R1_019.ab1    80 
  143  C BE426418Sn29P146A04P129E081F1_019.ab1   445 
  147    BE426418Sn29P146A04P129E081R1_019.ab1    88 
  159  C BE426418Sn29P146A04P129E081F1_019.ab1   429 
  167    BE426418Sn29P146A04P129E081R1_019.ab1   108 
  191  C BE426418Sn29P146A04P129E081F1_019.ab1   397 
  195    BE426418Sn29P146A04P129E081R1_019.ab1   136 
  211  C BE426418Sn29P146A04P129E081F1_019.ab1   377 
  215    BE426418Sn29P146A04P129E081R1_019.ab1   156 
  271  C BE426418Sn29P146A04P129E081F1_019.ab1   317 
  275    BE426418Sn29P146A04P129E081R1_019.ab1   216 
  287  C BE426418Sn29P146A04P129E081F1_019.ab1   301 
  291    BE426418Sn29P146A04P129E081R1_019.ab1   232 
  323  C BE426418Sn29P146A04P129E081F1_019.ab1   265 
  327    BE426418Sn29P146A04P129E081R1_019.ab1   268 
  339  C BE426418Sn29P146A04P129E081F1_019.ab1   249 
  347    BE426418Sn29P146A04P129E081R1_019.ab1   288 
  367  C BE426418Sn29P146A04P129E081F1_019.ab1   221 
  375    BE426418Sn29P146A04P129E081R1_019.ab1   316 
  467  C BE426418Sn29P146A04P129E081F1_019.ab1   121 
  475    BE426418Sn29P146A04P129E081R1_019.ab1   416 
  487  C BE426418Sn29P146A04P129E081F1_019.ab1   101 
  495    BE426418Sn29P146A04P129E081R1_019.ab1   436 
Contig length: old 656, new 656

Contig length: old 656, new 656
New start: 0