No. words: 1209; after pruning: 1183


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.3 (1,1:553)  533  0.00 0.18 0.00  BE426418Sn32P146A04P129E081R1_018.ab1        4   551 (56)  C BE426418Sn32P146A04P129E081F1_018.ab1   (50)   552     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE426418Sn32P146A04P129E081F1_018.ab1   602 
  102    BE426418Sn32P146A04P129E081R1_018.ab1    54 
  106  C BE426418Sn32P146A04P129E081F1_018.ab1   497 
  114    BE426418Sn32P146A04P129E081R1_018.ab1    66 
  118  C BE426418Sn32P146A04P129E081F1_018.ab1   485 
  122    BE426418Sn32P146A04P129E081R1_018.ab1    74 
  126  C BE426418Sn32P146A04P129E081F1_018.ab1   477 
  146    BE426418Sn32P146A04P129E081R1_018.ab1    98 
  150  C BE426418Sn32P146A04P129E081F1_018.ab1   453 
  154    BE426418Sn32P146A04P129E081R1_018.ab1   106 
  158  C BE426418Sn32P146A04P129E081F1_018.ab1   445 
  166    BE426418Sn32P146A04P129E081R1_018.ab1   118 
  178  C BE426418Sn32P146A04P129E081F1_018.ab1   425 
  186    BE426418Sn32P146A04P129E081R1_018.ab1   138 
  190  C BE426418Sn32P146A04P129E081F1_018.ab1   413 
  246    BE426418Sn32P146A04P129E081R1_018.ab1   198 
  262  C BE426418Sn32P146A04P129E081F1_018.ab1   341 
  266    BE426418Sn32P146A04P129E081R1_018.ab1   218 
  290  C BE426418Sn32P146A04P129E081F1_018.ab1   313 
  314    BE426418Sn32P146A04P129E081R1_018.ab1   266 
  346  C BE426418Sn32P146A04P129E081F1_018.ab1   257 
  358    BE426418Sn32P146A04P129E081R1_018.ab1   310 
  370  C BE426418Sn32P146A04P129E081F1_018.ab1   233 
  378    BE426418Sn32P146A04P129E081R1_018.ab1   330 
  462  C BE426418Sn32P146A04P129E081F1_018.ab1   141 
  470    BE426418Sn32P146A04P129E081R1_018.ab1   422 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0