No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:528)  517  0.00 0.00 0.00  BE426418Ta16P146A04P129E081R1_002.ab1        1   529 (68)  C BE426418Ta16P146A04P129E081F1_002.ab1   (66)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BE426418Ta16P146A04P129E081F1_002.ab1   595 
   86    BE426418Ta16P146A04P129E081R1_002.ab1    20 
   90  C BE426418Ta16P146A04P129E081F1_002.ab1   506 
  122    BE426418Ta16P146A04P129E081R1_002.ab1    56 
  130  C BE426418Ta16P146A04P129E081F1_002.ab1   466 
  150    BE426418Ta16P146A04P129E081R1_002.ab1    84 
  154  C BE426418Ta16P146A04P129E081F1_002.ab1   442 
  158    BE426418Ta16P146A04P129E081R1_002.ab1    92 
  162  C BE426418Ta16P146A04P129E081F1_002.ab1   434 
  174    BE426418Ta16P146A04P129E081R1_002.ab1   108 
  182  C BE426418Ta16P146A04P129E081F1_002.ab1   414 
  198    BE426418Ta16P146A04P129E081R1_002.ab1   132 
  206  C BE426418Ta16P146A04P129E081F1_002.ab1   390 
  274    BE426418Ta16P146A04P129E081R1_002.ab1   208 
  294  C BE426418Ta16P146A04P129E081F1_002.ab1   302 
  302    BE426418Ta16P146A04P129E081R1_002.ab1   236 
  358  C BE426418Ta16P146A04P129E081F1_002.ab1   238 
  366    BE426418Ta16P146A04P129E081R1_002.ab1   300 
  374  C BE426418Ta16P146A04P129E081F1_002.ab1   222 
  386    BE426418Ta16P146A04P129E081R1_002.ab1   320 
  474  C BE426418Ta16P146A04P129E081F1_002.ab1   122 
  482    BE426418Ta16P146A04P129E081R1_002.ab1   416 
  486  C BE426418Ta16P146A04P129E081F1_002.ab1   110 
  494    BE426418Ta16P146A04P129E081R1_002.ab1   428 
Contig length: old 663, new 663

Contig length: old 663, new 663
New start: 0