No. words: 1184; after pruning: 1158


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:537)  502  1.30 0.19 0.00  BE426418Ta19P146A04P129E081R1_029.ab1        1   538 (57)  C BE426418Ta19P146A04P129E081F1_029.ab1   (50)   539     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BE426418Ta19P146A04P129E081F1_029.ab1   589 
  169    BE426418Ta19P146A04P129E081R1_029.ab1   118 
  181  C BE426418Ta19P146A04P129E081F1_029.ab1   409 
  189    BE426418Ta19P146A04P129E081R1_029.ab1   138 
  209  C BE426418Ta19P146A04P129E081F1_029.ab1   381 
  237    BE426418Ta19P146A04P129E081R1_029.ab1   186 
  261  C BE426418Ta19P146A04P129E081F1_029.ab1   329 
  277    BE426418Ta19P146A04P129E081R1_029.ab1   226 
  285  C BE426418Ta19P146A04P129E081F1_029.ab1   305 
  301    BE426418Ta19P146A04P129E081R1_029.ab1   250 
  309  C BE426418Ta19P146A04P129E081F1_029.ab1   281 
  313    BE426418Ta19P146A04P129E081R1_029.ab1   262 
  325  C BE426418Ta19P146A04P129E081F1_029.ab1   265 
  337    BE426418Ta19P146A04P129E081R1_029.ab1   286 
  365  C BE426418Ta19P146A04P129E081F1_029.ab1   225 
  393    BE426418Ta19P146A04P129E081R1_029.ab1   342 
  489  C BE426418Ta19P146A04P129E081F1_029.ab1   101 
  497    BE426418Ta19P146A04P129E081R1_029.ab1   446 
Contig length: old 646, new 646

Contig length: old 646, new 646
New start: 0