No. words: 1172; after pruning: 1146


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.3 (1,1:527)  514  0.00 0.00 0.00  BE426418Ta21P146A04P129E081R1_027.ab1        1   526 (59)  C BE426418Ta21P146A04P129E081F1_027.ab1   (59)   528     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C BE426418Ta21P146A04P129E081F1_027.ab1   587 
   79    BE426418Ta21P146A04P129E081R1_027.ab1    20 
   83  C BE426418Ta21P146A04P129E081F1_027.ab1   505 
  139    BE426418Ta21P146A04P129E081R1_027.ab1    80 
  143  C BE426418Ta21P146A04P129E081F1_027.ab1   445 
  147    BE426418Ta21P146A04P129E081R1_027.ab1    88 
  151  C BE426418Ta21P146A04P129E081F1_027.ab1   437 
  191    BE426418Ta21P146A04P129E081R1_027.ab1   132 
  195  C BE426418Ta21P146A04P129E081F1_027.ab1   393 
  255    BE426418Ta21P146A04P129E081R1_027.ab1   196 
  275  C BE426418Ta21P146A04P129E081F1_027.ab1   313 
  283    BE426418Ta21P146A04P129E081R1_027.ab1   224 
  331  C BE426418Ta21P146A04P129E081F1_027.ab1   257 
  347    BE426418Ta21P146A04P129E081R1_027.ab1   288 
  355  C BE426418Ta21P146A04P129E081F1_027.ab1   233 
  395    BE426418Ta21P146A04P129E081R1_027.ab1   336 
  411  C BE426418Ta21P146A04P129E081F1_027.ab1   177 
  419    BE426418Ta21P146A04P129E081R1_027.ab1   360 
  463  C BE426418Ta21P146A04P129E081F1_027.ab1   125 
  467    BE426418Ta21P146A04P129E081R1_027.ab1   408 
  475  C BE426418Ta21P146A04P129E081F1_027.ab1   113 
  479    BE426418Ta21P146A04P129E081R1_027.ab1   420 
  491  C BE426418Ta21P146A04P129E081F1_027.ab1    97 
  499    BE426418Ta21P146A04P129E081R1_027.ab1   440 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0