No. words: 1194; after pruning: 1168


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:542)  531  0.00 0.00 0.00  BE426418Ta23P146A04P129E081R1_025.ab1        1   543 (68)  C BE426418Ta23P146A04P129E081F1_025.ab1   (40)   543     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE426418Ta23P146A04P129E081F1_025.ab1   583 
  252    BE426418Ta23P146A04P129E081R1_025.ab1   212 
  260  C BE426418Ta23P146A04P129E081F1_025.ab1   324 
  312    BE426418Ta23P146A04P129E081R1_025.ab1   272 
  316  C BE426418Ta23P146A04P129E081F1_025.ab1   268 
  332    BE426418Ta23P146A04P129E081R1_025.ab1   292 
  364  C BE426418Ta23P146A04P129E081F1_025.ab1   220 
  392    BE426418Ta23P146A04P129E081R1_025.ab1   352 
Contig length: old 651, new 651

Contig length: old 651, new 651
New start: 0